1. (2009) Birchler JA and Bass HW. "Part III, The Maize Genome, Cytogenetics and chromosomal structural diversity" in The Maize Handbook, (eds. JL Bennetzen and SC Hake); Springer. (in press: pp. 163-177))
2. (2008*) Beyrouthy M, Alexander K, Baldwin A, Whitfield M, Bass HW, McGee DL, Hurt MM. "Identification of G1-Regulated Genes in Normally Cycling Human Cells" PLoS ONE (accepted pending formatting).
3. (2008*) Okagaki RJ, Jacobs MS, Stec AO, Kynast RG, Buescher E, Rines HW, Isabel Val es MI, Riera-Lizarazu O, Schneerman M, Doyle G, Friedman KL, Staub RW, Weber DF, Kamps TL, Amarillo IFE, Chase CD, Bass HW, Phillips RL. Maize centromere mapping: A comparison of physical and genetic strategies. Journal of Heredity [ JOH Abstrat online | ahead of print PDF ]

4. (2007*) Amarillo FE and Bass HW A Transgenomic Cytogenetic Sorghum (Sorghum propinquum) BAC FISH Map of Maize (Zea mays L.) Pachytene Chromosome 9, Evidence for Regions of Genome Hyperexpansion. Genetics (Nov)177:1509-1526. [ PDF ]

5. (2006*) Lawrence CJ, Seigfried TE, Bass HW, and Anderson LK. Predicting chromosomal locations of genetically mapped loci in maize using the Morgan2McClintock translator. Genetics Mar;172(3):2007-2009.
   [ Genetics online | PDF ]

6. (2005*) Marian CO and Bass HW. The Terminal acidic SANT 1 (Tacs1) gene of maize is expressed in tissues containing meristems and encodes an acidic SANT domain similar to some chromatin-remodeling complex proteins. Biochemica Biophysica Acta - Gene Structure and Expression 1727:81-86.
   [ Abstract-Links | PubMed | online at BBA-GSE | PDF | full-length cDNA ]

7. (2004*) Bass HW, Krawetz JE, OBrian, GR, Zinselmeier C, Habben JE, and Boston RS. Maize ribosome-inactivating proteins (RIPs) with distinct expression patterns have similar requirements for proenzyme activation. Journal of Experimental Botany 55:2219-2233.
   [ Abstract-Links | PubMed | online at JXB | PDF ]

8. (2004*) Anderson LK, Salameh N, Bass HW, Harper LC, Cande WZ, Weber G, and Stack SM. Integrating genetic linkage maps with pachytene chromosome structure in maize. Genetics 166:1923-1933.
   [ Abstract-Links | PubMed 15126409 | Genetics online | PDF ]

9. (2004) Anderson LK, Salameh N, Bass HW, Harper LC, Cande WZ, Weber G, and Stack SM. Integrating genetic linkage maps with pachytene chromosome structure in maize. Maize Genetics Newsletter 78:16-17.

10. (2004) Bassie YR, Onokpise OU, Odland WE, and Bass HW. FISH analysis of retroelement distribution patterns along mitotic chromosomes. Maize Genetics Newsletter 78:59. [MNL-online | MNL-online | PDF ]

11. (2004*) Palko L, Bass HW, Beyrouthy MJ, and Hurt MM. The Yin Yang-1 (YY1) protein undergoes a DNA replication-associated switch in location from the cytoplasm to the nucleus at the onset of S phase. Journal of Cell Science 117(3):465-476.
    [ Abstract-Links | PubMed 14702388 | JCS-online | PDF ]

12. (2003*) Marian CO, Bordoli SJ, Goltz M, Santarella RA, Jackson LP, Danilevskaya O, Beckstette M, Meeley R, and Bass HW. The maize Single myb histone 1 gene, Smh1, belongs to a novel gene family and encodes a protein that binds telomere DNA repeats in vitro. Plant Physiology 133:1336-1350.
    [ Abstract-Links | PubMed 14576282 | Plant Phys-online | PDF + ]

13. (2003) Bass HW. Multi-author review (MAR) introduction:
    The conservation and divergence of telomeric structures, effects, and functions.
    Cellular and Molecular Life Sciences (CMLS) 60:2281-2282.
    [ CMLS online, vol 60(11) | PDF ]

14. (2003*) Bass HW. Telomere dynamics unique to meiotic prophase: formation and significance of the bouquet. Cellular and Molecular Life Sciences (CMLS) 60:2319-2324.
    [ Abstract-Links | CMLS online | A PDF ]

15. (2003*) Koumbaris GL and Bass HW. A new single-locus cytogenetic mapping system for maize (Zea mays L.): overcoming FISH detection limits with marker-selected sorghum (S. propinquum L.) BACs clones. The Plant Journal 35(5):647-659.
    [ Abstract-Links | PubMed 12940957 | Plant J-online | PDF ]

16. (2003*) Franklin AE, Golubovskaya I, Bass HW, and Cande WZ. Improper chromosome synapsis is associated with elongated Rad51 structures in the maize desynaptic2 mutant. Chromosoma 112:17-25.
    [ Abstract-Links | PubMed 12811575 | Chromosoma-online | PDF ]

17. (2003*) Bass HW, Bordoli SJ, and Foss EM. The desynaptic (dy) and desynaptic1 (dsy1) mutations in maize (Zea mays L.) cause distinct telomere-misplacement phenotypes during meiotic prophase. Journal of Experimental Botany 54(380):39-46.
    [ Abstract-Links | PubMed | J Exp Bot-online | 3D-Movies | PDF ]

18. (2002) Koumbaris G and Bass HW. Pachytene arm ratios for maize chromosome 9 in OMAd9.2, a maize chromosome addition line of oat. Maize Genetics Newsletter 76:62-63. [ MNL-online | PDF ]

19. (2001) Bass HW and Bordoli SJ. Variable distribution of meiotic homologs; on-line spinning projections of 3D data from chromosome painting and telomere FISH analysis of OMAd9.2. Maize Genetics Newsletter 75:63. [MNL-online | PDF ]

20. (2001) Bass HW, Kang LC, and Eyzaguirre A. Tom Thumb, a useful popcorn.
    Maize Genetics Newsletter 75:62-63. [MNL-online | PDF ]

21. (2001, invited article) Bass HW. "Chromosomes" In Plant Sciences, pp 157-160. (Ed. R. Robinson); Farmington Hills, MI: Macmillan Reference USA

22. (2000*) Bass HW, Riera-Lizarazu O, Ananiev EV, Bordoli SJ, Rines HW, Phillips RL, Sedat JW, Agard DA, and Cande ZW. Evidence for the coincident initiation of homolog pairing and synapsis during the telomere-clustering (bouquet) stage of meiotic prophase. Journal Cell Science 113:1033-1042.
    [ Abstract-Links | PubMed | JCS-online | 3D-Movies | PDF ]

23. (2000*) Bass HW, Nagar S, Hanley-Bowdoin L, and Robertson D. Chromosome condensation induced by geminivirus infection of mature plant cells. Journal Cell Science 113:1149-1160.
    [ Abstract-Links | PubMed | JCS-online, | 3D-Movies | PDF ]

24. (2000*) Ring BC, Bass HW, and Garza D. Construction and transposition of a 100-kilobase "extended" P element in Drosophila. Genome Research 10:1605-1616.
    [ Abstract-Links | PubMed | Genome Research online | PDF]

25. (1998*) Wein H, Bass HW, and Cande WZ. DSK1, a kinesin-related protein involved in anaphase spindle elongation, is a component of the mitotic spindle matrix. Cell Motility and Cytoskeleton 41:224-224.
    [ Abstract-Links | PubMed | PDF ]

PAPERS, submitted or in preparation (* indicates peer-reviewed journal)

1. (2008) Reno ML, Naylor GJP, Bass HW, and Steppan SJ. Biogeography of the genome: a case study of the human Olfactory Receptor gene superfamily. (in prep.)
2. (2008) Amarillo FE and Bass HW. "Cytogenetic Mapping in Plants" in Plant Cytogenetics, Volume I: Genome Structure and Chromosome Function (eds. HW Bass and JA Birchler); Springer. (in prep.)
3. (2008) Murphy SP and Bass HW. "Meiotic Chromosome Behavior in Plants" in Plant Cytogenetics, Volume I: Genome Structure and Chromosome Function (eds. HW Bass and JA Birchler): Springer. (in prep.)

PAPERS, earlier (1997-88, pre-FSU, * indicates peer-reviewed journal)

1. *Bass HW, Marshall WF, Sedat JW, Agard DA, and Cande WZ (1997). Telomeres cluster de novo before the initiation of synapsis; a 3-dimensional spatial analysis of telomere positions before and during meiotic prophase Journal Cell Biology 137:5-18.
   [ Abstract-Links | PubMed | JCB-online | PDF ]

2. *Gillikin JW, Zhang F, Coleman CE, Bass HW, Larkins BA, and Boston RS (1997). A defective signal peptide tethers the floury-2 zein to the ER-membrane.Plant Physiology 114:345-352.
   [ PubMed | Plant Cell Online | PDF ]

3. Dernburg AF, Sedat JW, Cande WZ, and Bass HW (1995) "Cytology of Telomeres" pp 295-338. In Telomeres, (eds. E. H. Blackburn and C. W. Greider); Cold Spring Harbor Lab Press.

4. *Bass HW, OBrian GR, and Boston RS (1995). Cloning and sequencing of a second ribosome-inactivating protein gene from maize (Zea mays, L.). Plant Physiology 107:661-662.
   [ PubMed-Abs | GenBank-Sequnce | patents ]

5. *Bass HW, Goode JH, Greene TW, and Boston RS (1994). Control of ribosome-inactivating protein (RIP) RNA levels during maize seed development. Plant Science 101:17-30.
   [ Abstract ]

6. *Bass HW, Webster C, OBriani GR, Roberts JKM, and Boston RS (1992). A maize ribosome-inactivating protein is controlled by the transcriptional activator Opaque-2. Plant Cell 4:225-234.
   [ PubMed | Plant Cell online | M83926_GenBank-Sequence | M83927_GenBank-Sequnce | PDF ]

7. Bass HW, Sisco PH, Murray DL and Boston RS (1990). Probes for the b-32 protein hybridize to loci on 7L and 8L. Maize Genetics Newsletter 64:97.

8. Shank BB, Bass HW, Sisco PH, Wurtzel E and Boston RS (1990). Isolation and mapping of a cDNA probe for the b-70 protein. Maize Genetics Newsletter 64:97.

9. *Wyatt R, Odrzykoski IJ, Stoneburner A, Bass HW, and Galau GA (1988). Multiple origins of Plagiomnium medium. Proc. Nat. Acad. Sci. USA 85:5601-5604.
   [ Abstract ]

10. *Galau GA, Bass HW, and Hughes DW (1988). Restrictions fragment length polymorphisms in diploid and allotetraploid Gossypium: Assigning the late embryogenesis-abundant (Lea) alloalleles in G. hirsutum. Molecular and General Genetics 211:305-314.
    [ PubMed ]

Conference Presentations & Seminars (1999-present, *=presenting author)

1. January 17-19, 1999; WZ Cande*, AE Franklin, C Cowan, E Kaszas, HW Bass, L Harper, & PM Carlton.
   Talk W143. "Meiotic prophase chromosome behavior in maize." Plant and Animal Genome VII Conference; San Diego; CA. http://www.intl-pag.org/pag/7/abstracts/pag7131.html

2. March 2, 1999; HW *Bass & D Garza.
   Poster. "Development of map-based cloning for maize." 1999 Symposium of the Consortium for Plant Biotehcnology Research, Inc.; Washington, D.C.

3. August, 1999; HW Bass*.
   Poster. "The development of map-based cloning tools for maize." Cambridge Healthtech Institute's Second Annual Symposium on Impact of Molecular Biology on Crop Production and Crop Protection; Minneapolis, MN.

4. November 13-14, 1999; BC Ring*, HW Bass, & D Garza.
   Talk. "In vivo construction and transposition of a 100 Kb P element" SouthEast Drosophila Research Conference; Emory University, Atlanta, GA.

5. March 22-26, 2000; D Garza*, BC Ring, S Khatri, C Trivigno, & HW Bass.
   Poster. "Development of a new method for functional analysis of the Drosophila genome: In vivo construction and transposition of a 100kb P element" 41st Annual Drosophila Research Conference; Pittsburgh, PA.

6. May 12-13, 2000; HW Bass*, MK Goltz, & G Koumbaris.
   Talk. "Analysis of meiotic telomere behavior." 11th Annual Plant Molecular & Cellular Biology Workshop; Crystal River, FL.

7. November 5-9, 2000; HW Bass*, WZ Cande, EM Foss, SJ Bordoli, G Koumbaris, M Goltz, & RA Santarella.
   Invited talk. "3D cytogenetics of telomere behavior and chromosome pairing during meiosis." for the symposium 'Plant Cytogenetics in the New Millennium'; Annual Meetings of the American Society of Agronomy, Crop Science Society of America, and the Soil Science Society of America; Minneapolis, MN.

8. January 9-14, 2001; L Palko*, HW Bass, & MM Hurt.
   Poster I-136: "YY1 and histone gene regulation - Temporal changes in cellular localization." Cell Cycle Meeting, Keystone Symposia; Taos, NM.

9. February 1, 2001; HW Bass*.
   Invited Seminar. "Analysis of meiotic telomere functions; 3D cytogenetics in pollen mother cells." Department of Agronomy, University of Florida, Gainesville, FL.

10. March 15-18, 2001; HW Bass*, O Danilevskaya, M Goltz, & RA Santarella.
    Poster. " Towards analysis of meiotic telomere functions." 43rd Annual Maize Genetics Conference; Lake Geneva, WI. http://www.agron.missouri.edu/cgi-bin/sybgw_mdb/mdb3/Reference/314981

11. May 4-5, 2001; G Koumbaris* & HW Bass.
    Talk. "3D FISH analysis of the structure of maize chromosome 9." Twelfth Annual Plant Molecular & Cellular Biology Workshop; Daytona Beach, FL

12. March 14-17, 2002; G Koumbaris*, RD Swofford, & HW Bass.
    Poster. "3D FISH analysis of the structure of maize chromosome 9." 44th Annual Maize Genetics Conference. Orlando, FL. http://www.agron.missouri.edu/cgi-bin/sybgw_mdb/mdb3/Reference/641700

13. March 14-17, 2002; CO Marian*, M Goltz, RA Santarella, O Danilevskaya, & HW Bass.
    Poster. "Identification of a telomere DNA binding protein in maize" 44th Annual Maize Genetics Conference; Orlando, FL.

14. April 8-12, 2002; HW Bass*, SJ Bordoli, & EM Foss.
    Invited Talk. "Analysis of meiotic telomere functions in maize." Annual meeting of the Society for Experimental Biology; Swansea, Wales.

15. January 11-15, 2003; HW Bass*
    Invited Talk. "Telomere behavior at meiotic prophase in higher plants." Plant and Animal Genome XI Conference; San Diego, CA. http://www.intl-pag.org/11/abstracts/W41_W267_XI.html

16. January 11-15, 2003; G Koumbaris, RD Swofford, & HW Bass*
    Poster. "Single-locus cytogenetic mapping in maize (Zea mays); Localization of three maize-RFLP-selected sorghum BACs by FISH with maize chromosome-addition lines of oat." Plant and Animal Genome XI Conference; San Diego, CA. http://www.intl-pag.org/11/abstracts/P5d_P454_XI.html

17. March 13-16, 2003; CO Marian*, M Goltz, RA Santarella, O Danilevskaya, R Meeley, & HW Bass
    Poster. "Isolation and characterization of a maize cDNA encoding a telomere repeat DNA oligonucleotide-binding protein." 45th Annual Maize Genetics Conference; Lake Geneva, WI http://www.maizegdb.org/cgi-bin/displayrefrecord.cgi?id=885097

18. March 13-16, 2003; G Koumbaris & HW Bass*
    Poster. "Single-locus cytogenetic mapping in maize with marker-selected sorghum BACs as FISH probes on pachytene spreads from maize-chromosome-addition lines of oat." 45th Annual Maize Genetics Conference; Lake Geneva, WI http://www.maizegdb.org/cgi-bin/displayrefrecord.cgi?id=885011