2nd Batch of 20 core bin marker RFLP probe sequences RFLP Full-length insert sequences (RFLP-FLIS) Low throughput, high quality, human-verified, both-strand sequence. A sub-project of the "Cytogenetic Map of Maize" P.I. H.W. Bass; NSF Plant Genome Research Program http://www.cytomaize.org/ PRE-RELEASED VERSIONS Working GenBank flatfiles: AY987961 tub1 (CBM 1.01) LOCUS AY987961 156 bp DNA linear PLN 14-APR-2005 DEFINITION Zea mays clone CBM 1.01 RFLP core bin marker probe tub1 genomic sequence. ACCESSION AY987961 VERSION AY987961 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 156) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Full-length insert sequence of maize RFLP core bin marker probe tub1 (CBM1.01), internal fragment, with M13Reverse JOURNAL Unpublished REFERENCE 2 (bases 1 to 156) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (29-MAR-2005) Biological Science, Florida State University, Biology Unit I, Chieftan Way, Tallahassee, FL 32306-4370, USA COMMENT LocalID: bankit695021 Bankit Comment: bass@bio.fsu.edu. FEATURES Location/Qualifiers source 1..156 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="1" /clone="CBM 1.01" misc_feature 1..156 /note="RFLP core bin marker probe tub1" BASE COUNT 54 a 34 c 31 g 37 t ORIGIN 1 gctactacta atgctgatta atgatagaaa cgaaacaaac ccacgacaga tgattaccga 61 cctactacta ctacgacgac gaaaagcagc aaatgattag tttttcatga ctgacggtga 121 ctgaatgtga agcagcctat tctagtcctg gagatc // DQ001865 asg62 (CBM 1.07) LOCUS DQ001865 465 bp DNA linear PLN 07-APR-2005 DEFINITION Zea mays RFLP-FLIS probe asg62 (CBM 1.07) genomic sequence. ACCESSION DQ001865 VERSION DQ001865 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 465) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe asg62 (CBM1.07), entire PstI fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 465) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (07-APR-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit697611 FEATURES Location/Qualifiers source 1..465 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="1" /map="Bin 1.07" /plasmid="p-asg62" /genotype="B73" /note="Organelle: nucleomorph" BASE COUNT 125 a 115 c 101 g 124 t ORIGIN 1 ctgcagctcc atggccttct gtttggtcat caatgcctca ctcgagtcgc tggaatcgtc 61 tttgtcggtt atgtcacaga gaagggcatt attgtcttca tctcggtcat cctcggtgca 121 gaggctgaga tcaaggctgt ccaacatcgt gacaggtgaa gacaagaaag cttttgggga 181 ggagaaacta ccgaacagag gaagaagaat agcaaggtat ggaggtgtat attctccttt 241 tctattccgt ttgttacaag gcagtctcgc cattatatgc cattcgaatg ggtcacatac 301 ataatcatgt attacagcca aatcggtcca acaagcttaa actcaagctt caaatatcta 361 gcacgccagc caccagaact actctgcatt ctcctgttgt tcttcagtca caattgtgac 421 atgaccccca ttgaagaacc atctgccccc agatcgatac tgcag // DQ001866 umc34 (CBM 2.04) LOCUS DQ001866 934 bp DNA linear PLN 07-APR-2005 DEFINITION Zea mays RFLP-FLIS probe umc34 (CBM 2.04) genomic sequence. ACCESSION DQ001866 VERSION DQ001866 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 934) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe umc34 (CBM2.04), PstI fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 934) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (07-APR-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit697617 FEATURES Location/Qualifiers source 1..934 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="2" /map="CBM 2.04" /plasmid="p-umc34" /note="Organelle: nucleomorph" BASE COUNT 217 a 228 c 268 g 221 t ORIGIN 1 ctgcaggctt gcagccatgc aacttgctgt tggctctctc aacagccatg gggattcctc 61 tcgtcacacg catccttgtg tgggcagagg gcagctcttg ttgcaggaag taggacgtca 121 cttcgagcga gggtagctag ctactagcta gctgcttatc tctgttctgt tcattggtca 181 tgttgaagga gagaaaccac acgccgttca gcatcagcta gcccggccga aagacacgaa 241 aggttgcaaa tgggacacat gtaattgtaa aaggcccatt attgccatga ttcacttatg 301 ctgatggaca aagagcaaga gctgaggctg caaatcggac acatgtagaa ggccactact 361 gttgtcatgc tgcacttatg ttgatggaga agtgtacccg aacaaaccat tgggggtcag 421 cagcaagcat gtgctgcatg cacgacgacg gcgaaattaa aattagcggc ccgccggccg 481 gcatgctttg accggccggt gaccccgatt ggcaagggat cgatgcccat ggatgggtat 541 ggagctgttc agagaaggca tcggtacggt cagcgcgcgt acgtacttga gcgttatgta 601 tggagatggt aacggctatg gcgccggccg gccggccgta acggcacgta cgtgatcgcg 661 tccttttgtc ctccgcgcgc gcgcacacgc agctccttgc gtagcttttt tcttctatcc 721 gcttgggccg gccggggagg aatgaagtac gtacgggcaa aggattcatg caagtacaca 781 gaagaatctc ggccttcatt caatcattct tctctatcta tctgtccaat aatggaaggg 841 gggaatggag tatataaacg aactgcctcg aagttggcaa gggagttata gattcttgca 901 cacattgcct tggttccgtt ccgttggcct gcag // DQ001867 umc32 (CBM 3.01) LOCUS DQ001867 1019 bp DNA linear PLN 07-APR-2005 DEFINITION Zea mays RFLP-FLIS probe umc32 (CBM 3.01) genomic sequence. ACCESSION DQ001867 VERSION DQ001867 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 1019) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert (FLIS) sequence of maize RFLP core bin marker probe umc32 (CBM3.01), PstI fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 1019) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (07-APR-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit710642 FEATURES Location/Qualifiers source 1..1019 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="3" /map="CBM 3.01" /plasmid="p-umc32" /note="Organelle: nucleomorph" BASE COUNT 218 a 240 c 271 g 290 t ORIGIN 1 ctgcaggtcc ttgcagcagg ggagctcctc gtcgtggcac acgacgggcg ccgtgtcgtg 61 tggagccgcg cagcagcaga agcgccagcg gtgccaggtc acctcctctc ccgctcgtct 121 cgctttccgt tccccattac ccttccggag ccggtcgatt cgtcgccttc tcggccaccc 181 ttcgaaatcc tcgcgcgatt ccggtctcgg gcggattcgc gtgtcgttta gggttcgggt 241 tgccgccggg attgggggtt ttcggcggcc aggggtttct tagggcacta gggtttggga 301 tttggacgcg tcaattcgag tgccgaggtg ttcgctgggg atgagttggt agcgaatatg 361 gtacgatcgg gggtctttct tgggttgatt gatgcaatgc cggtcataat tgacctgatt 421 tcgtttcttc gattaatcta gcggatcggt gaacgctgtc aggagatggc ttcccttcga 481 ttttatttca tcctgcaaag gattgcgata agcattgcgg cagttgtttt ggcctttatg 541 ataaagatgc atttgttcta ttcatatttt tatactacta ctaactgcca atcagtccag 601 cgtccacacg actaattaaa catagggttc tggatcgcgg aacagaagga ctttgcctgt 661 ccttttcgtg cattctttta atgctttgat tggtataatt actggctagc ctactgtttt 721 acagggttct tccagcgatc aagctggttc cagctcaagt agttctctgc aaatatcaga 781 accagaaccc caacaagtcc aagaagaaga ggattactat atggaggatg attgtgatga 841 tgattttgat ggctacgacg aagatgatta tgacttcgat gaagctgact ttaaccagca 901 ccttgctgat aaatttgatg atttggatct tcctccaggc gtggaggcca ccgtaccttg 961 gttgcagaaa actacaccca aggaagatgt caaagagcca cctaaatcaa atactgcag // DQ001868 asg48 (CBM 3.04) LOCUS DQ001868 1617 bp DNA linear PLN 07-APR-2005 DEFINITION Zea mays RFLP-FLIS probe asg48 (CBM 3.04) genomic sequence. ACCESSION DQ001868 VERSION DQ001868 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 1617) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert (FLIS) sequence of maize RFLP core bin marker probe asg48 (CBM3.04), PstI fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 1617) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (07-APR-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit710644 FEATURES Location/Qualifiers source 1..1617 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="3" /map="CBM 3.04" /plasmid="p-asg48" /genotype="B73" /note="Organelle: nucleomorph" BASE COUNT 409 a 358 c 440 g 410 t ORIGIN 1 ctgcaggtcg aacggcgcta gcaccggaaa gaagtcggat aggttgggcg tgccgaggag 61 ctcggtcaac ttggcgacga gtgccctgaa ctccttccct atggcagctc gctcgctctc 121 gctcccgatg gtgccacccc agagggtgct ggtgaccacg ttcatcatgt tgacgaacat 181 cagggcgccg aggtccaccg gctcgccggc ctgggactgg gagtagaggt agcgcagggt 241 agacctgaac tcgcgccggc gaaggccgta caggctgtcg aggcctgcgg ggctcagcat 301 ctcctgcgcg cagaggcgcc ggagcaggcg ccacttgggt ccgaccggga cgcccacgat 361 gttctccacg ccgtcgaacg ccaccgcgcg gccggcgtcg gggatgacgc ggttggagaa 421 gacagggtcc ttgtcacgga ggacctcgtg ggccagctcc ggggaggtga caacgatttc 481 caccttggag cccagacgga tggcgaagac aggaccgtac ttcgcggcga ggccagcgaa 541 gcaggcgtgt aggttccggt cgaggaaagg gaggctgccc acaagcggta ggcccgtcgg 601 tccaggcggc aggcggctgg tgcggcgccg ggtgacggcg agatacagta ccgacagaaa 661 aaggaaagca gcgtagaaaa ggtttgctgg tgccgtggcc tccatggcta ctggggaagc 721 ttgcgatcga gtcgtagttc gtagtggcga tggcgtcgat ccaatgtaaa tctatgtata 781 cttgcaggcg gcgagctcga aacgtcagca gcttctggca ggatgggaag aggtatcgga 841 cgatgcgagc aaggcagatg ctccgcccgt tgctgtcatt tgcttttttg tcatatatat 901 taggcctctt tggttggttt ggtagggtcc tgcatcatcc accttggctc tgacttctct 961 taaaatatat agctctggcc tagtaattta cagtaatcca ggagtgaatt tacatagagg 1021 accatgaggg cggccgccct aggccacgaa tccgatggac cttccgcatg tctttttata 1081 taggtatcta aattttgacc cgttaaaaaa tctgaaaaaa taataatata ctgaagttaa 1141 gtttgtgaga aacatcaatg tattctattt atatttttag taatatcaaa aagatggatt 1201 ctttcccttc aagaaaaaat agattcttat ttttaatatt tttttattgt ttatcggatc 1261 ttatttacca tgtatgtttg tgacacggtg gcatcagatg aataaaactt tttaaaatta 1321 aaattattga agaactattc aaggtataca atgtcttaag attgaccgat tggtctgaca 1381 actttatgtg tgaaaaaata attgtttgct aaggttgata tcgacttcgc atcacgaaaa 1441 agttttaaga tattatacga atatttcgat atatttttaa taccacgtta atttctactg 1501 atataaaagt gtgtatatca aataagtaaa ataaaattat atttatatag aagaggcacc 1561 agtatttaag tctgtccggc ctatattacc tctaaaatgt cagctccggc cctgcag // DQ005498 umc102 (CBM 3.05) LOCUS DQ005498 1023 bp DNA linear PLN 25-MAY-2005 DEFINITION Zea mays RFLP-FLIS probe umc102 (CBM 3.05) genomic sequence. ACCESSION DQ005498 VERSION DQ005498 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 1023) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe umc102 (CBM3.05), PstI fragment, M13F strand JOURNAL Unpublished REFERENCE 2 (bases 1 to 1023) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (12-APR-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, USA COMMENT LocalID: bankit711618 Bankit Comment: plasmid vector name = pUC19##note = RFLP core bin marker probe umc102#. FEATURES Location/Qualifiers source 1..1023 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="3" /map="CBM 3.05" /note="umc102" misc_feature 1..1023 /note="full-length insert sequence (FLIS) of maize RFLP core bin marker probe umc102 (CBM3.05), PstI fragment, M13F strand" BASE COUNT 216 a 274 c 270 g 263 t ORIGIN 1 ctgcaggcgc ctagaggtta ccactacgct tgctgccggc cagtagtagc tagcagttag 61 tttctctggg tttctggcac cggacggcga ccacgctcgc aaagacaccg gcctctctct 121 ggcgcgggca caggtacgta tgaggctgct gtgctgtcac atggcgtgaa gacatgcaga 181 acttgaagat gaagcttccc actgctgctg ctttacatga ctggactgga ccagatcgcc 241 ctgcctctca gattcagaga ttgacgagca catgcatgaa cgaaagagcg agatatatcg 301 gtcgatcgat gagcaagtat acggccatca agcgcagtat gtatgtatgt atgcatcggc 361 ctccgtgcgt gctctgcatg ctgcaataat atatacccaa tataatagct cagctgccgg 421 agtacgtagg cttgctctcc ggccggccat gcactgctgc tgctcccttt attttggact 481 ggttttattt gcgcgtgtgt tggtgaggtg tcgatctcat gccattttcc atgctttgtt 541 ggtcagagtg aagcgaacga acgagctgag ctgagctgag caacaaactt ccagccagcc 601 tacagctttc gttcgtacgt acgtacgtca gttagcacgc tgtctgtccg ttccaacaac 661 acatcctctg ctgctgatgc tgatgccgtc tcgccatcat tgtgtgtgat ccgtgtctac 721 tgtacgtacg tggatatata taggggtcgg cgtgggcccc gtgtctcttt ctcttccttt 781 gatgtgagtg atatcgtcgt ctttcgcata gataggcctt gggccagctc gctcgcttta 841 ttcctagcta ccctacacac actacacaac cccggccacg gccaggcgaa gagagagaga 901 gagagaggtg gttagctact aggctgcatt ggagtctgcg aaagcagatc tctcaaagca 961 cgacgaccca gattccttcc ctagcctctc tgctatatgc atggcgacgt actggtactg 1021 cag // DQ005499 csu25 (CBM 3.10) LOCUS DQ005499 960 bp mRNA linear PLN 25-MAY-2005 DEFINITION Zea mays RFLP-FLIS probe csu25 (CBM 3.10) mRNA. ACCESSION DQ005499 VERSION DQ005499 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 960) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe csu25 (CBM3.10), cDNA insert, M13Reverse strand JOURNAL Unpublished REFERENCE 2 (bases 1 to 960) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (12-APR-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, USA COMMENT LocalID: bankit711634 Bankit Comment: note = RFLP core bin marker probe csu25##vector name= pBluescript SK-#. FEATURES Location/Qualifiers source 1..960 /organism="Zea mays" /mol_type="mRNA" /cultivar="B73" /db_xref="taxon:4577" /chromosome="3" /map="CBM 3.10" /note="csu25" misc_feature 1..960 /note="full-length insert sequence (FLIS) of maize RFLP core bin marker probe csu25 (CBM3.10), M13 reverse strand" BASE COUNT 259 a 226 c 234 g 241 t ORIGIN 1 ggagcgtaca tgcttcgctt caagcagtac tttgcagaag ccgtagagga gcagaaggat 61 atcatgagac ggcatggcga caagatcgat catgacatcc tggcagagat ggatgtcctc 121 taccggtgca tcaaggaggc ccttcgtctc cacccgccgc tgattatgtt gcttcgccaa 181 tcacacagtg acttcaccgt gacaacaaag gaaggcaaag agtacgacat ccccaagggc 241 cacatcgtcg cgacatcgcc atcctttgcc aacaggctgc cccacatcta caagaaccct 301 gactcgtatg accctgatcg gttcggtcct ggaagggagg aggacaaggc tgcaggcgcc 361 ttctcataca tctccttcgg tggcggcagg catgggtgcc tcggtgagcc cttcgcctac 421 ctgcagatca aggcaatctg gacgcaccta ctgaggaact ttgagttcga gctggtatcg 481 ccattcccag agaacgactg gaacgccatg gtggttggca tcaagggcga ggtgatggtt 541 aactacaaga ggcggaagct tgccgtggac aactaagatt gtggccgcag tctctagatg 601 cttgcttctt gttgattcaa ttgttttcac atgtttgtca gcatttgttc agtgcaagtt 661 ctgctgtacg caagccagcc ttgttagggg tgtttctgtt gtttaggatt ttgaaatttg 721 tttcactatg gggccgccat gatctgcaac ttctgcatgt tcagcttcct ggctaagcat 781 tcccctatgt caaatctgta acttgtagca tctataagcc tgtgggtctt ttgttcaaat 841 cctgatgttt atcattgtct tagatggatg taaacacaaa cataacaaat aacctaatga 901 ataaactcag gtgttcagtg tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa // DQ007988 npi386 (CBM 4.04) LOCUS DQ007988 1180 bp DNA linear PLN 14-APR-2005 DEFINITION Zea mays RFLP-FLIS probe npi386 (CBM 4.04) genomic sequence. ACCESSION DQ007988 VERSION DQ007988 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 1180) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe npi386 (CBM4.04), PstI fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 1180) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (14-APR-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit712140 Bankit Comment: RFLP core bin marker probe npi386##vector name = pUC19#. FEATURES Location/Qualifiers source 1..1180 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="4" /map="CBM 4.04" /plasmid="p-npi386" /note="Organelle: nucleomorph" BASE COUNT 278 a 310 c 346 g 246 t ORIGIN 1 ctgcaggatg tcgaggtcga cgacgtggac gcggtcctcg ccgtggaagg cctcgaagat 61 ggcctggttg gcggtgaagt gcgcgaactt gatgtagggg caggcctggt acaggatctg 121 gtacaccttg agcgtgtccg gcgacggggg gaacgtgtag ggcgcgacgc cggcgccggc 181 gccggaggcg ccggaggagg aggacgggtt gttggaggag aggcgggcgg ctagggcgtc 241 ggcgaagtag gaggcgacgc gctgcatgga gtcgcccagc ggggaggcga cgcggcggag 301 gaggtgcagg tgacgcagcg ccgacggctg gtcccccttg gagacgaagt cggcgcacgc 361 cagcagcagg tgcaccagct gaaggccgct gtcctgctcc tgcatgcatc atgagtggag 421 tacgttaata actgcgctgc gcatcagaaa attttcacaa gaactctaaa cttgatcaca 481 aaataataat tcgcaaaaaa atataactga aatactcaaa ttgtactact caacgccaat 541 tgccgtcgcc gtcgccgtcg cgtacgtaaa cgacacgtgt tcatgagaag caacacggtg 601 gttttggact gcgctattgt cacgtacgca cgttccgatg gtaacgagga cccaaaaata 661 tcatcgcatg cagggctctc tgcgcagatt ccaactagaa gcatcaaggc cgagctatag 721 cttcacacaa acaacaagat atacgtacgg atgcatcgtc tttcctctgg ctagcttcta 781 ccgtttgcat gcatggcatg gcactgtgac catttggcca atccaggaag aagcctgatg 841 ccatgttttt ttttaattta ttttctatgc ataataaccc aaggaaacat gccatgtttg 901 gtacttcgat atgcatgcca aattcttcca acacaagtac cgtttgcatg catgcatgcg 961 tatatatggt aaataaataa attacctgtt catcagcctc tgtctggatg actgaaccca 1021 gcatgctgtg cagcgacgac tcagctgccg cccactggtg gtcggacttg gccatctggt 1081 gctgcaacga cgacgtcgtc gtcaagccgc cgccgccgcc gccgcctgcg aactgtcctg 1141 cgtagtacaa gtcagacggc aggccgacgc ccatctgcag // DQ007989 umc66 (CBM 4.07) LOCUS DQ007989 1036 bp DNA linear PLN 14-APR-2005 DEFINITION Zea mays RFLP-FLIS probe umc66 (CBM 4.07) genomic sequence. ACCESSION DQ007989 VERSION DQ007989 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 1036) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe umc66 (CBM4.07), PstI fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 1036) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (14-APR-2005) Biological Science, Florida State Univesity, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit699011 Bankit Comment: RFLP core bin marker probe umc66##vector name= pUC19#. FEATURES Location/Qualifiers source 1..1036 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="4" /map="CBM 4.07" /plasmid="p-umc66" /note="Organelle: nucleomorph" BASE COUNT 267 a 233 c 293 g 243 t ORIGIN 1 ctgcaggcga tccaacctag tacagaagaa taatcggtgg acttcgttat ctcttacaca 61 taaggtctta tctcacattc ggtgtaggct tcttgagccg gttcatggag tgtccaaaga 121 ccgaccatca agctgcacta aaacatctcc tacgctatgt cacggtgaca gcagattacg 181 gactacagta caagtgggga gaagggagtc taaagctagt cgagtacccg gacaatgact 241 tggccgggga cgtcgacgat cgtcgtagca ctactggtgc cattttcttc cacggaagga 301 gcccggtctc atggcagtca caaagccaga aggctgtggc taaatcatcc tgtgaggcga 361 agtacatggc gagcgttgta gcagctgctt aggtgatgtg gctacatagt ttgttggaag 421 aaagaggtgc taggttttcc tgctcagcca acgacgattc ggatggacaa catggcggca 481 atcgctctcg cgaagaatct agtccatcat gaacgcagta agcacattga catcaagttc 541 aatttcacca gagagtgtgt ggagtgtggc gacatcgagc tagagcagat caggattgct 601 tatcaactgg ctgatgcact caccaaggca cttgggaaga tgcagctcca gaagatccgt 661 agattgatag gagttatgta aatcacatga tcaggagagt agaagtaggg ggagattgtt 721 agatacttcc actctctgct cgtttgtctt ggcgggagtt tttgttttcc gtctattgag 781 tcaataaggg cgcgagccga ggcctgtcct gagccacgcc atacgacgcg atcgccgccg 841 cgcaacgtgc ggagtgcgcc cggcttgact agagtgtggg tggcgtgaga acgtgggatc 901 cggatcacgc cgcgagtctg aataaaagaa aaaaaaacaa aaggcggcag accacccgtt 961 ttggtctgtc caaagaaatt cgagtgtgtt ctctgctgta gtgctattaa tcttcttgcg 1021 agcgatagag ctgcag // DQ007990 php20608 (CBM 4.10) LOCUS DQ007990 1451 bp DNA linear PLN 14-APR-2005 DEFINITION Zea mays RFLP-FLIS probe php20608 (CBM 4.10) genomic sequence. ACCESSION DQ007990 VERSION DQ007990 SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 1451) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe php20608 (CBM4.10), PstI fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 1451) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (14-APR-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit712142 Bankit Comment: RFLP core bin marker probe php20608; containing 100% sequence identity (867/867) with entire B73 GSS (GenBank accession CG345121, GI:34262387)##vector name= pUC19#. FEATURES Location/Qualifiers source 1..1451 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="4" /map="CBM 410" /plasmid="p-php20608" /note="Organelle: nucleomorph" BASE COUNT 276 a 445 c 501 g 229 t ORIGIN 1 ctgcagcgtg ccctacagtg cacggcaccg cagcacacac atctcacacg cggatagcgc 61 cagacgagag cgcggccaca tggcccgcat gaacggagaa cgacgcgcgc cggcgcccgt 121 gcgctccgat cgcctaccgt cgataggcca agcgttccct gagcggatca tggccacacg 181 cggacggcgg atcgcccgga gccccgcacc aaagcacacc ggccacgtcg cgcggcggtc 241 ggcgcccgtc ggcgtcgctc gttaaaccaa aaaggcgcca ttagcctgac ggcagcgacg 301 gacaccgacg agcccgcgcc gcgacgcgcg ccgaattaac tccgccgttg aacgctccgc 361 cgcgttgcgc atggaggcat gctttgtttg cttccgaacg ccgccgagag cgaggcatag 421 gcgcatgtgc atgtgcgtgc ctgcctgccg ccagaagtag ccttgcccgc gcgcgcacgg 481 cggctggccc gtataacgtg acgttcgctt gggattttgc aggcaggctg ttagcgtcgt 541 gacgtgcaag cgaactgggt tcgcacagct gtgcgatctg cgtccgagag gcgacggcgc 601 tgtccacgtc tcgccaccgt atggtccacg gcgtcgcacc gtgcgcgttt gcaggtgctg 661 ggtgctggct cagtataaat gcaagcttcc atcgccaact ctagccgcac acgctcgcga 721 ttcaacaaag acgtacgtac atgcacaaaa ctagagcgag ctgtgtgtgt gtgtgttcgt 781 catttcctcg atcatggcga aggcgcaggc gcaggtggcg gcgaggttca tgatggaggc 841 gccgccgccg caggtggtgt cggtcatgcg gcggaggaag gcgccgagga gcctgagcac 901 catcgccgag gacgacaggg agatgctggc gccgtgcggg tcaccgtcgg accacggcca 961 cgtacataca cataactaga gcgagtagag ataccgtctc ttactgtgtg tgtgtgtgtg 1021 tgtgtttatc aactcctcga tgcatggcga aggcgcaggc gcaggtggcg gcgaggttca 1081 cgacggaggt ggcgccgccg caggtggtgt cggtcatgcg acgaaggaag gggccgagga 1141 gcctggacac catcgccgag gacgacaggg agcagcagct ggcgtgcggg tcgccatcgg 1201 accacggcct cgcgacggcg tggtcgtcgc tccagaggat accgacgcca ccgcagccgc 1261 cgcgggagcg cgcaggtggg tccgtgacga gggacctcag caagaacttc ttggactccc 1321 acggctgcca gcaggccagc ggctgggagg gtggacacat gctaggccac cggcgagccg 1381 tgcatgcgct ggagcttcac aaggtcggag cttgttgaag agggaagaga gaaaatctag 1441 cttagctgca g // DQ007991 tub4 (CBM 5.03) LOCUS DQ007991 230 bp DNA linear PLN 14-APR-2005 DEFINITION Zea mays RFLP-FLIS probe tub4 (CBM 5.03) mRNA sequence. ACCESSION DQ007991 VERSION DQ007991 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 230) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe tub4 (CBM5.03), cDNA insert, M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 230) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (14-APR-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit699013 Bankit Comment: RFLP core bin marker probe tub4##vector name= pUC118#. FEATURES Location/Qualifiers source 1..230 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="5" /map="CBM 5.03" /plasmid="p-tub4" /note="Organelle: nucleomorph" BASE COUNT 70 a 37 c 38 g 85 t ORIGIN 1 cgactacgta ttcctacaat cctactacct taagtatgta tattcatgta ctgccgtatt 61 tgccttactg cttttattag cttgtgtgtg tatctacagt cgtgtgtgtt agtgttttct 121 gaaattgtga tatattgcca ccgctgtcca gattctgtgg gtatgtttat tcatataatt 181 ggaatgctct ctgttcttgt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa // DQ015673 csu93 (CBM 5.05) LOCUS DQ015673 677 bp mRNA linear PLN 21-APR-2005 DEFINITION Zea mays RFLP-FLIS probe csu93 (CBM 5.05) mRNA sequence. ACCESSION DQ015673 VERSION DQ015673 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 677) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe csu93 (CBM5.05), cDNA insert from M13Reverse primer JOURNAL Unpublished REFERENCE 2 (bases 1 to 677) AUTHORS Bass,H.W. and Figeuroa,D.M. TITLE Direct Submission JOURNAL Submitted (21-APR-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit713708 Bankit Comment: RFLP core bin marker probe csu93##XhoI site is from maize, not the vector/adapter##vector name= pBluescript SK(-)#. FEATURES Location/Qualifiers source 1..677 /organism="Zea mays" /mol_type="mRNA" /db_xref="taxon:4577" /chromosome="5" /map="CBM 5.05" /plasmid="p-csu93" /genotype="B73" /note="Organelle: nucleomorph" BASE COUNT 175 a 169 c 182 g 151 t ORIGIN 1 ggtatacaga gagatcgaag aaagagagag agagacctat acagagatgg cctccggcgg 61 tggctccaag cagctgaagg ctagtcttct catggtggta gcagctctgc tcctcctcat 121 ctgcacctgc actaccaggg ggcaagcggc aaggccggag ccaggatccg agggccacac 181 gccacagcag ctgcgcgctg atgtatccat ctccgtcgtt gctggtcatg agaagaagag 241 tggctcatca gtggccgtgg tggaaatgcg tcgagaagat ccggatcagg cggcgagaga 301 atgtgaggac gacgacggag acgacgaaca ggagtgcctg atgaggagga cgttgctcgc 361 tcacaccgac tacatctaca cccaggggaa gcacaactag ctagtcactg ctcactagcc 421 tgtgctgctg gctcatgctc atgtcatgtc gaggaaacaa gttcaaggga caaaaacaaa 481 acaaaaaagc tcgcatggtt cacgagctag cctagccaac ctgaagttct acagtgccgt 541 acgtcaactg tgtggattgt tttaaaatat atacctagtc tttttctttc tgcagttctg 601 ctagctgtgg attattttca tatatatata tatacctcgc taattacccc ctgtgatttc 661 ccatcggctt tctcgag // DQ015674 npi393/G23A-06 (CBM 6.03) LOCUS DQ015674 1249 bp DNA linear PLN 21-APR-2005 DEFINITION Zea mays RFLP-FLIS probe npi393/G23A-06 (CBM 6.03) genomic sequence. ACCESSION DQ015674 VERSION DQ015674 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 1249) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe npi393/G23A-06 (CBM6.03), PstI fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 1249) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (21-APR-2005) Biological Sciences, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit713710 Bankit Comment: RFLP core bin marker probe npi393/G23A-06##vector name= pUC19#. FEATURES Location/Qualifiers source 1..1249 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="6" /map="CBM 6.03" /plasmid="p-G23A-06" /note="Organelle: nucleomorph" BASE COUNT 282 a 349 c 358 g 260 t ORIGIN 1 ctgcaggtct ggcagcgcta cgtgtgccgc gcggcggcgg ggtcgggccg ggaagaggtg 61 tgctcgacgg cggggcgcct gacgccggcg atgtactccc agatggtcgc cgtggccggc 121 ctcagcgacg ggctgaggcg gcagtccccg gccctggccg acgtcgcgag ctgcgtgacc 181 gtgcggcgcg cgttccggac ggtggggcgg cgcggctgcc ccccgctgcg gcgggacagc 241 cgccgggtgt accaggcgct gctcgcggcg tcggcggccg ggatgctcgc cgcggccgcg 301 tggctcgtgc actcccggga gcggcggcgg cggcgggaca gcgagcggtt caaggtgtcg 361 ccgtacaggc tccccatcga cgacaaggtg ctgctcaaca gccccagacg cccgtacagg 421 cgagtgtagc tgtagtgtaa acacaagctt ggtcatcgaa tcgaccagac gctgacggat 481 cggacctctc gagcacagtg acgacggtgc ggtgcggtgc ggtgcaggtc cggtagtagg 541 ggggaaatgg aatcagagca gttttggcag ttgaattctg taaagtgtat aaataagtat 601 gtgtccttgt actgtggtaa ctgtacatga gtggctacgc gaataactga accatgcatt 661 aaacccttct tggcgtgaaa gttggcatgg ctaaacaaac tcaaaaggca gagcttcttt 721 atacagaacg atgcaaacaa tgataacaat aaacaaaaag ctagctactc atcattcata 781 gccgttgcat tagctccagt cagtctagct atagattcca actacgactc agtccaaatt 841 ttgcccacgc ctaatccgaa ttttctacca aaacgaagca gtaacacgca ctgtaacaga 901 catgtagggc ccgtggccac cacccacgtc gtcgcccgct ttgctcgcgt ccgtggtcct 961 tctccttccc ggccatcatc atactacctc atacgtgcca ccctccctca gacatctcaa 1021 atgaagtctc aagtggatag agaattagat attacacatg cgccttccgc acaaatgcag 1081 cagagtgtgc cgggcaactt ttaacagccc tcacacggta gtaaattgtt ttagctagcc 1141 gttatttaaa tgcactagag ttaataatta tctctaactt tttagcagat tcaaaccgag 1201 ccttagttta ttcatgctgt aaaggagagc cagcatccat gagctgcag // DQ059316 umc38 (CBM 6.06) LOCUS DQ059316 1022 bp DNA linear PLN 12-MAY-2005 DEFINITION Zea mays RFLP-FLIS probe umc38 (CBM 6.06) genomic sequence. ACCESSION DQ059316 VERSION DQ059316 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 1022) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe umc38 (CBM6.06), PstI fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 1022) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (12-MAY-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit705817 Bankit Comment: RFLP core bin marker probe umc38 in vector pUC19#. FEATURES Location/Qualifiers source 1..1022 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="6" /map="CBM 6.06" /plasmid="p-umc38" /note="Organelle: nucleomorph" BASE COUNT 238 a 297 c 263 g 224 t ORIGIN 1 ctgcagggca tggccggcga agggacagga cgacgaggac ggcacgcatc cagccatgca 61 tgtgtaagta ggcaacgcaa agccggccgg ccatctgcat gcgcgcgcaa acgtgtgctg 121 ccgggcgctt ccgctttgcg gcacgtcttc ttcgaagtgg tcaatggagt atgtatggat 181 gcattgccgt cgatcggctg ccatgcaaat gcatccgcgg ctcaggtgac tagtcagagt 241 cagatagacg catggtcggc acgaacagct gccgttaagg ttagttgatg aaatggcaga 301 tcacatgcat gcatgatgcg atcggcgcca tcgcattgcc ggtatcctac gattgcatgc 361 aaagtgtgca tcgtcccagg atcttcccga tcatgcacgg ggccctttta tgctgtcccc 421 attcacgcat gtcgatcgca tttctttctt tctttctttc tttctcgtac caaatcccag 481 atggagaaga agattaacca cacacacaca tgcatccggg ctccggcgta tcgtttcggt 541 gcgcgcggcc agccatgcat aatgcggtca gctgaacgta ggaggacaca cacacgacga 601 tcgaggacca ctgttcagcg aacaggtatt caacgaggcc cccgccccat ccatcgcgtt 661 ctgcgtcaga tctgtcaggt agcatccacc caaacagggc ctctgcatga caacgagaac 721 acatgagcga cgagctcgac ctggccacca ttagcatggt gaggaaagcg acggaggacc 781 tactgctgct gcatccgttg ctcggcattg cccttaatta ctcgtcgaga tgcatggtac 841 tacgtaatgg cattcattga agtgcaccac gccacgcatc agggccacaa cattaaactc 901 cccgcccaac tcatttttat ccctgaaaac actactactc ctgtactatg gctgtatcag 961 aggcggaatt aaaattcatg gcttcccgtt ccatcctcgt cggatccagc agctagctgc 1021 ag // DQ059317 asg49 (CBM 7.03) LOCUS DQ059317 400 bp DNA linear PLN 12-MAY-2005 DEFINITION Zea mays RFLP-FLIS probe asg49 (CBM 7.03) genomic sequence. ACCESSION DQ059317 VERSION DQ059317 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 400) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe asg49 (CBM7.03), PstI fragment with t7 JOURNAL Unpublished REFERENCE 2 (bases 1 to 400) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (12-MAY-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit718622 Bankit Comment: RFLP core bin marker probe asg49 in vector pGEM3Zf#. FEATURES Location/Qualifiers source 1..400 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="7" /map="CBM 7.03" /plasmid="p-asg49" /note="Organelle: nucleomorph" BASE COUNT 118 a 89 c 78 g 115 t ORIGIN 1 ctgcaggaac tgcgtctgaa tcataaaaat ggcccgcatc ataggcggag acttggaaca 61 ccgagatttg tttttgttta agtttcagcc caatgtgtac atcgaattaa taaatgcatc 121 ctctgctaga gaaacccatt ttgaatgagt tgatgctctg actacagaat ccaccattct 181 tccgaagctg cttcctacaa aactcgagat gcaacaattg aaatccttgt ggaaaggatg 241 tgtttttgat agccttcagt ctttcagatg gaaattctcc agccttcatg accttggcag 301 aaactatacc actgctgcct agtgcatttg ttatctgaag aaaactggaa cgtgaacggc 361 cattcattgc acgtccatta ctttcataaa aaaactgcag // DQ059318 umc168 (CBM 7.06) LOCUS DQ059318 1072 bp DNA linear PLN 12-MAY-2005 DEFINITION Zea mays RFLP-FLIS probe umc168 (CBM 7.06) genomic sequence. ACCESSION DQ059318 VERSION DQ059318 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 1072) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe umc168 (CBM7.06), PstI fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 1072) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (12-MAY-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit705821 Bankit Comment: RFLP core bin marker probe umc168 in vector pUC19#. FEATURES Location/Qualifiers source 1..1072 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="7" /map="CBM 7.06" /plasmid="p-umc168" /note="Organelle: nucleomorph" BASE COUNT 285 a 183 c 188 g 416 t ORIGIN 1 ctgcaggtca agtttttttt aaaatttgtt ctttaaccaa ccattttcat gtacacatcg 61 tggagacgtg gacccataga tcattttttt gttattcagc aatcttgata tctcatgtat 121 tatgtgccac cattgaagct gagagctata gtttatgttc tgtatcctat cttcaattat 181 acttttgttg ggttaaccta gtatgatctt ctagaaatta gtaaatttca tattgagcat 241 atgttggctc atagaaagca cccttgtcaa ataaatgcag aacaattctc tactgagctt 301 ttattggatt gattttttat ttatactgaa tgctagtaga attctctccc ttcctcctgc 361 attgtccgag aaagaatgta gcatggcaac actgcataca attgtgtcat taacttattt 421 tcttgttttt ctaagttaaa tgtatttata tgttatatat gcctttgtgc tgctcttaga 481 catttttgtg gcctctaaaa tatctaattt ttctgatgtg cattagacat tattcatgat 541 tattctgaat ggtaaaatta ccttttatag gtctcagaac atgcgacttg gtcgggctgc 601 ttttattttc gtattataca agcagctctt tcagctgttg gtgcacctga gaatctggtg 661 cacataataa ctgggtatga gtgcagcttt ctaaattctt attagtttac aggctagctg 721 cacatttctt acctggactc tgttttttgt tggtttttag ttttgcggaa acaggccaag 781 ctcttgtatc atcagtagac aaaataatat ttgtgggatc accaggtgtt ggaaaaatgg 841 tatacttctc atctgaagta gtattttctt aagctcatgc aattaatatt cttcactttt 901 tagtatatgc tttggtggat tctctctaac ctgtgaacat gtttttttga cggttcatag 961 ttattctcct tgactcagta cttcaatgcc cagatagacc atgaccaatt gccagaaagt 1021 ggcaggttta aggactaaac atgtatatat gtattagata atatatctgc ag // DQ059319 npi220/G10F-01 (CBM 8.01) LOCUS DQ059319 406 bp DNA linear PLN 12-MAY-2005 DEFINITION Zea mays RFLP-FLIS probe npi220/G10F-01 (CBM 8.01) genomic sequence. ACCESSION DQ059319 VERSION DQ059319 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 406) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe npi220/G10F-01 (CBM8.01), HindIII fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 406) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (12-MAY-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit718626 Bankit Comment: RFLP core bin marker probe npi220/G10F-01 in vector pUC8#. FEATURES Location/Qualifiers source 1..406 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="8" /map="CBM 8.01" /plasmid="p-G10F-01" /note="Organelle: nucleomorph" BASE COUNT 106 a 101 c 90 g 109 t ORIGIN 1 aagcttcatc cgcgctcttt gctccatgat catcttctgc ttcgactcga gtggcatttc 61 ctcgatcttg gtcgctggtt tcggctcttc tggctgctcc gcaccagcct cagaaccctc 121 tgccgtggca tggacaagaa ccagcctctt ctcagcgaaa gaagcacaag tagcagtcac 181 attcagaggg ctctgttggg aggacaggtt cttgcattgc agccttgagg ctgcaataac 241 agtaatgaca aaagtgcaaa tcacttaact ggatctagtg cacactaatt cacatagttc 301 aattctgaat tcacatggac ctaatggagt catgggttca tgactcgatg gttgcaatac 361 gatagatgaa ataaggtttc acagcgttat taaccaaaac aagctt // DQ059320 umc124 (CBM 8.03) LOCUS DQ059320 1162 bp DNA linear PLN 12-MAY-2005 DEFINITION Zea mays RFLP-FLIS probe umc124 (CBM 8.03) genomic sequence. ACCESSION DQ059320 VERSION DQ059320 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 1162) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe umc124 (CBM8.03), PstI fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 1162) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (12-MAY-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit718628 Bankit Comment: RFLP core bin marker probe umc124 in vector pUC19#. FEATURES Location/Qualifiers source 1..1162 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="8" /map="CBM 8.03" /plasmid="p-umc124" /note="Organelle: nucleomorph" BASE COUNT 199 a 382 c 346 g 235 t ORIGIN 1 ctgcaggcag tctgagtcca caagtcatgg tacacgtaca cgtgatgagt ccccacgtgt 61 gccctttgca atcaccgctg gcgcctgacg tggcgccaga agctgtcgcc cctggaagct 121 ttgagtggat ttgttttttt tccaccgatc ccgattcgga tccgattccg cggcaggcgg 181 cattcccagc ctcccaaacc catttccctc tccgatcaaa tcaaatcaaa ctcaaaccga 241 cacgggaccc acgccgcatc tccgcctccg cagatcgccg ccgcctacac gcgcccctcc 301 gcgcgccgat ggccgccgcg gacccgccgc cgcgcgggga ggccgcgccc gcgctgaagc 361 ggagcgccag catcgaccgg ataccggcgg acgcgcgccg catcctgcac cgcctcgccg 421 gggacctctg gggcggcgac gtggaccccg gcgcgctggc cgtgtcccag ctcaggggcg 481 ccatgaccaa cgaggtcttc cggatcacct ggcccggcgg cgaggccgag ggcaacggcc 541 cgcgcaaggt gctcgtgcgc atctacggcc ggggcgtcga ggtcttcttc gaccgcgccg 601 acgaggtccg caccttcgag tgcatgtcgc gccacggcca ggggccccgc ctcctgggcc 661 gcttcgccaa cggccgcgtc gaggagttca tcaacgccag ggtacactac gcctctacca 721 ccctaaatgc gtgatgtgtc tgctcggatc cgttccgcgg ttgtttcttg tcatggctca 781 ctcgcgcgtt gctcgcgtcc tggccttgcc agaccctctc cgccgcggat ctgcgcgacc 841 cggagatgtc cgcgctgatt gccaagaagc tgcgcgagtt tcacgatctc gacatgcctg 901 gacctaggga cgtgtcattg tggcagaggc tcaagtatgc cattgttttt tttttggtga 961 gaaacgtgtt tgaattctga ttccaatctg attgcttggt gttgtatgaa tcaggcggtg 1021 gcttggggag gctcgtgaca ggtgttctca ggaagagtct aaccaatttc agctgaataa 1081 actaggtgat gagatttcag tgctggagaa gacgctctcg gggctccaac agtcagtagg 1141 attctgccat aacgatctgc ag // [[ DQ059321 php20075 (CBM 10.01) LOCUS DQ059321 1311 bp DNA linear PLN 12-MAY-2005 DEFINITION Zea mays RFLP-FLIS probe php20075 (CBM 10.01) genomic sequence. ACCESSION DQ059321 VERSION DQ059321 SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 1311) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe php20075 (CBM10.01), PstI fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 1311) AUTHORS Bass,H.W. and Figeuroa,D.M. TITLE Direct Submission JOURNAL Submitted (12-MAY-2005) Biological Science, Florida State University, Bio Unit I, Chieftan Way, Tallahassee, FL 32306, United States COMMENT LocalID: bankit705825 Bankit Comment: RFLP core bin marker probe php20075 in vector pUC19; 100% sequence identity in a 781 nt overlap with maize genotype B73 GSS (GenBank accession CG335752, GI:34253018); 100% sequence identity with entire (500 nt) maize genotype B73 GSS (GenBank Accession CG233323, GI:34133209)#. FEATURES Location/Qualifiers source 1..1311 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="10" /map="CBM 10.01" /plasmid="p-php20075" /genotype="B73" /note="Organelle: nucleomorph" BASE COUNT 315 a 400 c 349 g 247 t ORIGIN 1 ctgcagagtg cggcggggag tgccggcggc ggtgctccaa gacgcaccac aagaagccgt 61 gcctcttctt ctgcaacaag tgctgcgcca agtgcctgtg cgtgccgcct ggcacctacg 121 gcaacaagga gacctgcccc tgctacaaca actggaagac caagaaagga gggcccaagt 181 gcccgtgagt cgtgagaaga tggcggccca atacgcggtt ttcccggcgg ctacgcgggc 241 gggccgccgg cccatcgtaa cctaccaccg tagttggaag cgtcgtagga taggttagga 301 ataaataata gcctctcttt ttttttttgc cttgtttcgg tgtttgtttg ggccgggccg 361 gctgccgctt ctctggtctc tggtctaaaa agttcccgaa aaatattata tatttaataa 421 gaagaagaag gaggggaaaa aatcagtgtg accttttcgc tggaacgagg gatgagatgg 481 ggaaaaaatc agtgtcactg acctgtagca gcagcagtag cagcgcccac cagcaccagc 541 ggcgccccgg ccgattggac gcgaaccaga aacagacacg acggcgtgtc catcgaccga 601 tctcctcgcg ccaatggcag acacgctggc cctgcccacc aggccaccac caccaccacc 661 accaccaatg gatccagagc gatttgacgg cagccgatcc gatcctcagc ctgtacctgt 721 acctgtacgt gcgcacaggc acagcacaca agtggcggct ggctgtggct ggctggaaaa 781 gatccaccca caggagagag cagagctagc agaagaagag aaggcaaggc aacagctcca 841 aactccaacc aagtttgcgg cgctgggagc caattcgcgc agctggccgc aaaggaaagc 901 ggagagaggg cttcaattgc actgcacgcg gctcctcttc ctcctcctcc gatccccggc 961 cccttcacat gcagcaagct ctcacatcac atcccaaccc gtccgtccgt ccgtcgcaaa 1021 cggtcacgcg cgccagccag ccaactccat cacccgggcg gtggtgtgcg tgcatacgca 1081 ttcatcaacc actgttgccc acacaccaca cccacaggcc acatgaaaat gaattggagc 1141 caacgattgg taggggacct ccgggcccta gtacgtaccg ggtcttggca tccatctatc 1201 tatcagcccc cgccttcttc ttcttccttc tgatagctag aataccatta gtagccaagg 1261 tgatattttt tttatacgca tgagcatgac gatgaactag ctaagctgca g // DQ059322 umc130 (CBM 10.03) LOCUS DQ059322 634 bp DNA linear PLN 12-MAY-2005 DEFINITION Zea mays RFLP-FLIS probe umc130 (CBM 10.03) genomic sequence. ACCESSION DQ059322 VERSION DQ059322 KEYWORDS . SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACCAD clade; Panicoideae; Andropogoneae; Zea. REFERENCE 1 (bases 1 to 634) AUTHORS Figueroa,D.M. and Bass,H.W. TITLE Full-length insert sequence (FLIS) of maize RFLP core bin marker probe umc130 (CBM10.03), PstI fragment with M13Forward JOURNAL Unpublished REFERENCE 2 (bases 1 to 634) AUTHORS Bass,H.W. and Figueroa,D.M. TITLE Direct Submission JOURNAL Submitted (12-MAY-2005) Biological Science, Florida State University, Bio Unit I, Chieftan WayFSU, Tallahassee, FL 32306-4370, United States COMMENT LocalID: bankit718636 Bankit Comment: RFLP core bin marker probe umc130 in vector pUC19#. FEATURES Location/Qualifiers source 1..634 /organism="Zea mays" /mol_type="genomic DNA" /db_xref="taxon:4577" /chromosome="10" /map="CBM 10.03" /plasmid="p-umc130" /note="Organelle: nucleomorph" BASE COUNT 147 a 180 c 180 g 127 t ORIGIN 1 ctgcaggcct cacagtctgg ccatggcgtt cgctccgctt gcgccgcctg agtcacggcc 61 aagggggaag aaggtcatca tgggtacaag tacaataggg tctcgtcgga gctccaaagc 121 agggctctgg cgcatcaacg gccgcctcaa catgacattg gattctacaa accgattttg 181 caatattcac aaaaacaaat cgatgtacaa gagaaagcat tctactacta ctaccaccgt 241 gttttcgtgc atgtttccac catgggcgag agacccgagg cgatgaccgg caaattaagc 301 ggcttccgtt gctgtcgttt cgacgtggaa agtattggag ctttcttgta aagattcaga 361 aacagtggcg gcggatgtag catcaacacg cccgatggat tcagtggcag ctgtgacagt 421 gacggtgaca gcgacggcct cttccccctc ctctgcctcc tcacccaccg caatggccgg 481 cacgtcgtaa ccgtgccccg gacccggacg acggccggca tggccagatt cagtgtagag 541 tctaaggagg ttggccaggt ccggcgagga ggagtgcacc gaccccggca agaagtccac 601 gagcgactgg tagttgttgc catcgccact gcag // rflp-2ndBatch.doc Page 1 of 1 Last printed 5/27/05 5:26 PM