BSC4933(05)/ISC5224(01) Lab Report #3



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BSC4933(05)/ISC5224(01) Introduction to Bioinformatics Laboratory

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Lab Report #3

Lab 3's report will be a little different. You'll have to first finish your FindPatterns run before you can complete the report, so you won't be able to do it the same day as you do the lab. When FindPatterns does finish, return to the form, and list your chosen lab tutorial project 'molecular system' name.

1) OK, now that you've finished your FindPatterns run tell me about it. First of all, what GenBank subdivision did you search?

2) What FindPatterns MisMatch level did you specify?

3) Did FindPatterns find what is was supposed to find? Of the total finds, approximately what percentage was the gene you were looking for (at least as is obvious just from the entries' definition lines in the FindPatterns output?

4) What was the total number of sequence entries searched by FindPatterns? How many of these sequences had the patterns you searched with, i.e. how many 'finds' were there?

Press when you have completed this form, or press to clear all fields and start over.




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