Amphibian Systematics and Phylogenetics
AmphibiaWeb
http://amphibiaweb.org/
Frogs of Australia
http://frogs.org.au/frogs/
Pontifical Universidad Catolica del Ecuador Museum http://www.puce.edu.ec/zoologia/vertebrados/amphibiawebec/index.html
Center for North American Herpetology
http://www.naherpetology.org
Wikipedia chorus frog page
http://en.wikipedia.org/wiki/Chorus_frog
Ecuadorian Resources
Yasuni National Park Amphibians
http://tropicalfrogs.net/yasuni/index.htm
Pontifical Universidad Catolica del Ecuador Museum http://www.puce.edu.ec/zoologia/vertebrados/amphibiawebec/index.html
Frog husbandry and frog in vitro fertilization
Frog husbandry—Gerhardt Lab
http://www.biosci.missouri.edu/gerhardt/frog%20resources.htm
Xenopus in vitro fertilization (Harland lab website)
http://tropicalis.berkeley.edu/home/index.html
Genome Sequencing Projects
Xenopus tropicalis genome sequencing and genetic mapping project
http://tropmap.biology.uh.edu/index.html
http://genome.jgi-psf.org/Xentr4/Xentr4.home.html
Ambystoma genome sequencing and genetic mapping project
http://www.ambystoma.org/
Anolis genome sequencing project
http://www.broad.mit.edu/models/anole/
NCBI Eukaryotic genome projects
http://www.ncbi.nlm.nih.gov/genomes/leuks.cgi
JCI Eukaryotic genomics
http://genome.jgi-psf.org/euk_home.html
Genome sequencing companies
454 Life Sciences
http://www.454.com/
Illumina (formerly Solexa)
http://www.illumina.com/
Pacific Biosciences
http://www.pacificbiosciences.com/index.php
Lab Resources
Primer3
http://frodo.wi.mit.edu/cgi-bin/primer3/primer3.cgi
Postdoctoral Funding Opportunities
University of California President’s Postdoctoral Fellowship Program
http://www.ucop.edu/acadadv/ppfp/
NESCent (National Evolutionary Synthesis Center)
http://www.nescent.org/index.php
NSF Postdoctoral Fellowships
http://www.nsf.gov/funding/education.jsp?fund_type=3
Software
Comparative Methods
Generally convenient website for identifying the most useful comparative method for your question of interest (still under modification but currently useable)
http://treetapper.org/
List on Joseph Felsenstein’s website
http://evolution.genetics.washington.edu/phylip/software.html
Brownie
http://www.brianomeara.info/brownie/
CoMET
http://www.lifesci.ucsb.edu/eemb/labs/oakley/software/comet.htm
BayesTraits
http://www.evolution.reading.ac.uk/SoftwareMain.html
Phylogenetics
List of phylogenetics and population genetics programs maintained by Joseph Felsenstein
http://evolution.genetics.washington.edu/phylip/software.html
MrBayes
http://mrbayes.csit.fsu.edu/
PAUP
http://paup.csit.fsu.edu/
Garli
http://www.bio.utexas.edu/faculty/antisense/garli/Garli.html
MetaPiga
http://www.ulb.ac.be/sciences/ueg/html_files/MetaPIGA.html
Phylogeography
PhyloMapper
http://www.evotutor.org/PhyloMapper/
Mesquite
http://mesquiteproject.org/mesquite/mesquite.html
Population Genetics
For two useful review papers on population genetic methods see:
Excoffier and Heckel 2006. Computer Programs for population genetics data analysis: a survival guide. Nature Reviews Genetics 7:745–758.
Manel et al. 2005. Assignment methods: matching biological questions with appropriate techniques. TREE 20:136–142.
List of phylogenetics and population genetics programs maintained by Joseph Felsenstein
http://evolution.genetics.washington.edu/phylip/software.html
MIGRATE
http://popgen.sc.fsu.edu/Migrate/Migrate-n.html
IM
http://lifesci.rutgers.edu/~heylab/heylabsoftware.htm#IM
Arlequin
http://cmpg.unibe.ch/software/arlequin3/
Genepop
http://genepop.curtin.edu.au/
Geneland
http://www2.imm.dtu.dk/~gigu/Geneland/
Structure
http://pritch.bsd.uchicago.edu/software/structure2_1.html
Structurama
http://www.structurama.org/authors.html
Landscape Genetics
Geneland
http://www2.imm.dtu.dk/~gigu/Geneland/ |