2010 Publications, FSU Biological Science

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Aledealat, K., G. Mihajlovic, K. Chen, M. Field, G. J. Sullivan, P. Xiong, P. B. Chase, and S. von Molnar. 2010. Dynamic micro-Hall detection of superparamagnetic beads in a microfluidic channel. Journal of Magnetism and Magnetic Materials 24:L69–L72.

Araujo, M. B., and W. R. Tschinkel. 2010. Worker allometry in relation to colony size and social form in the fire ant Solenopsis invicta. Journal of Insect Science 10:94.

Bassar, R. D., M. C. Marshall, A. Lopez-Sepulcre, E. Zandona, S. K. Auer, J. Travis, C. M. Pringle, A. S. Flecker, S. A. Thomas, D. F. Fraser, and D. N. Reznick. 2010. Local adaptation in Trinidadian guppies alters ecosystem processes. Proceedings of the National Academy of Sciences of the USA 107:3616–3621.

Bell, A. K., L. M. Chiappe, G. M. Erickson, S. Suzuki, M. Watabe, R. Barsbold, and K. Tsogtbaatar. 2010. Description and ecologic analysis of Hollanda luceria, a Late Cretaceous bird from the Gobi Desert (Mongolia). Cretaceous Research 31:16–26.

Blake, C. B., and M. Meredith. 2010. Selective enhancement of main olfactory input to the medial amygdala by GnRH. Brain Research 1317:46–59.

Bou-Assaf, G. M., J. E. Chamoun, M. R. Emmett, P. G. Fajer, and A. G. Marshall. 2010. Advantages of isotopic depletion of proteins for hydrogen/deuterium exchange experiments monitored by mass spectrometry. Analytical Chemistry 82:3293–3299.

Brito, I. L., H.-G. Yu, and A. Amon. 2010. Condensins promote coorientation of sister chromatids during meiosis I in budding yeast. Genetics 185:55–U104.

Brusatte, S. L., M. A. Norell, T. D. Carr, G. M. Erickson, J. R. Hutchinson, A. M. Balanoff, G. S. Bever, J. N. Choiniere, P. J. Makovicky, and X. Xu. 2010. Tyrannosaur paleobiology: new research on ancient exemplar organisms. Science 329:1481–1485.

Buckley, H. L., T. E. Miller, A. M. Ellison, and N. J. Gotelli. 2010. Local- to continental-scale variation in the richness and composition of an aquatic food web. Global Ecology and Biogeography 19:711–723.

Bushey, D., K. A. Hughes, G. Tononi, and C. Cirelli. 2010. Sleep, aging, and lifespan in Drosophila. BMC Neuroscience 11:56.

Butler, R. J., P. M. Galton, L. B. Proor, L. M. Chiappe, D. M. Henderson, and G. M. Erickson. 2010. Proceedings of the Royal Society B 277:375–381.

Butcher, M. T., P. B. Chase, J. W. Hermanson, A. N. Clark, N. M. Brunet, and J. E. A. Bertram. 2010. Contractile properties of muscle fibers from the deep and superficial digital flexors of horses. American Journal of Physiology—Regulatory Integrative and Comparative Physiology 299:R996–R1005.

Cason, A. M., B. Kwon, J. C. Smith, and T. A. Houpt. 2010. c-Fos induction by a 14 T magnetic field in visceral and vestibular relays of the female rat brainstem is modulated by estradiol. Brain Research 1347:48–57.

Cavallin, M. A., K. Powell, K. C. Biju, and D. A. Fadool. 2010. State-dependent sculpting of olfactory sensory neurons is attributed to sensory enrichment, odor deprivation, and aging. Neuroscience Letters 483:90–95.

Cerquera, L. M., and W. R. Tschinkel. 2010. The nest architecture of the ant Odontomachus brunneus. Journal of Insect Science 10:64.

Cooper, W. J., and S. J. Steppan. 2010. Developmental constraint on the evolution of marsupial forelimb morphology. Australian Journal of Zoology 58:1–15.

Easton, E. E., D. Thistle, and T. Spears. 2010. Species boundaries in Zausodes-complex species (Copepoda: Harpacticoida: Harpacticidae) from the north-eastern Gulf of Mexico. Invertebrate Systematics 24:258–270.

Eckert, C. G., S. Kalisz, M. A. Geber, R. Sargent, E. Elle, P.-O. Cheptou, C. Goodwillie, M. O. Johnston, J. K. Kelly, D. A. Moeller, E. Porcher, R. H. Ree, M. Vallejo-Marin, and A. A. Winn. 2010. Plant mating systems in a changing world. Trends in Ecology & Evolution 25:35–43.

Erickson, G. M., P. J. Currie, B. D. Inouye, and A. A. Winn. 2010. A revised life table and survivorship curve for Albertosaurus sarcophagus based on the Dry Island mass death assemblage. Canadian Journal of Earth Sciences 47:1269–1275.

Figueroa, D. M., and H. W. Bass. 2010. A historical and modern perspective on plant cytogenetics. Briefings in Functional Genomics 9:95–102.

Gignac, P. M., P. J. Makovicky, G. M. Erickson, and R. P. Walsh. 2010. A description of Deinonychus antirrhopus bite marks and estimates of bite force using tooth indentation simulations. Journal of Vertebrate Paleontology 30:1169–1177.

Gilbert, D. M. 2010. Evaluating genome-scale approaches to eukaryotic DNA replication. Nature Reviews Genetics 11:673–684.

Gilbert, D. M. 2010. Cell fate transitions and the replication timing decision point. Journal of Cell Biology 191:899–903.

Goodwillie, C., R. D. Sargent, C. G. Eckert, E. Elle, M. A. Geber, M. O. Johnston, S. Kalisz, D. A. Moeller, R. H. Ree, M. Vallejo-Marin, and A. A. Winn. 2010. Correlated evolution of mating system and floral display traits in flowering plants and its implications for the distribution of mating system variation. New Phytologist 185:311–321.

Gornish, E. S., and T. E. Miller. 2010. Effects of storm frequency on dune vegetation. Global Change Biology 16:2668–2675.

Hiratani, I., and D. M. Gilbert. 2010. Autosomal Lyonization of replication domains during early mammalian development. Cell Biology of Stem Cells (Advances in Experimental Medicine and Biology) 695:41–58.

Hiratani, I., T. Ryba, M. Itoh, J. Rathjen, M. Kulik, B. Papp, E. Fussner, D. P. Bazett-Jones, K. Plath, S. Dalton, P. D. Rathjen, and D. M. Gilbert. 2010. Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis. Genome Research 20:155–169.

Houle, D. 2010. Numbering the hairs on our heads: the shared challenge and promise of phenomics. Proceedings OF THE National Academy of Sciences of the USA 107:1793–1799.

Houle, D., D. R. Govindaraju, and S. Omholt. 2010. Phenomics: the next challenge. Nature Reviews Genetics 11:855–866.

Houpt, T. A., J. A. Cassell, A. Hood, M. DenBleyker, I. Janowitz, K. Mueller, B. Ortega, and J. C. Smith. 2010. Repeated exposure attenuates the behavioral response of rats to static high magnetic fields. Physiology & Behavior 99:500–508.

Houpt, T. A., and C. E. Houpt. 2010. Circular swimming in mice after exposure to a high magnetic field. Physiology & Behavior 100:284–290.

Hughes, K. A. 2010. More than one way to blanch a lizard. Proceedings of the National Academy of Sciences USA 107:1815–1816.

Hughes, K. A. 2010. Mutation and the evolution of ageing: from biometrics to system genetics. Philosophical Transactions of the Royal Society B Biological Sciences 365:1273–1279.

Johnson, A. M., G. Chappell, A. C. Price, F. H. Rodd, R. Olendorf, and K. A. Hughes. 2010. Inbreeding depression and inbreeding avoidance in a natural population of guppies (Poecilia reticulata). Ethology 116:448–457.

Klusza, S., W.-M. Deng. 2010. poly is required for nurse-cell chromosome dispersal and oocyte polarity in Drosophila. Fly 4:128–136.

Kwon, B., and T. A. Houpt. 2010. A combined method of laser capture microdissection and X-Gal histology to analyze gene expression in c-Fos-specific neurons. Journal of Neuroscience Methods 186:155–164.

Kwon, B., and T. A. Houpt. 2010. Phospho-acetylation of histone H3 in the amygdala after acute lithium chloride. Brain Research 1333:36–47.

Lee, C. T., and B. D. Inouye. 2010. Mutualism between consumers and their shared resource can promote competitive coexistence. American Naturalist 175:277–288.

Lemmon, E. M., and A. R. Lemmon. 2010. Reinforcement in chorus frogs: lifetime fitness estimates including intrinsic natural selection and sexual selection against hybrids. Evolution 64:1748–1761

Lenhert, S., F. Brinkmann, T. Laue, S. Walheim, C. Vannahme, S. Klinkhammer, M. Xu, S. Sekula, T. Mappes, S. Schimmel, and H. Fuchs. 2010. Lipid multilayer gratings. Nature Nanotechnology 5:275–279.

Lenhert, S., C. A. Mirkin, and H. Fuchs. 2010. In situ lipid dip-pen nanolithography under water. Scanning 32:15–23.

Levitan, D. R., and A. P. Stapper. 2010. Simultaneous positive and negative frequency-dependent selection on sperm bindin, a gamete recognition protein in the sea urchin Strongylocentrotus purpuratus. Evolution 64:785–797.

Levitan, D., R. Twitto, R. Levy, L. C. Lyons, and A. J. Susswein. 2010. A brief retraining regulates the persistence and lability of a long-term memory. Learning & Memory 17:402–406.

Longrich, N. R., J. R. Horner, G. M. Erickson, and P. J. Currie. 2010. Cannibalism in Tyrannosaurus rex. PLoS One 5:e13419.

Lu, J.-J., F. Li, C. S. Murphy, M. W. Davidson, and D. M. Gilbert. 2010. G2 phase chromatin lacks determinants of replication timing. Journal of Cell Biology 189:967–980.

Lu, S. Q., P. Das, D. A. Fadool, and L. K. Kaczmarek. 2010. The slack sodium-activated potassium channel provides a major outward current in olfactory neurons of Kv1.3^-/- super-smeller mice. Journal of Neurophysiology 103:3311–3319.

Makovicky, P. J., D.-Q. Li, K. Gao, M. Lewin, G. M. Erickson, and M. A. Norell. 2010. A giant ornithomimosaur from the Early Cretaceous of China. Proceedings of the Royal Society B Biological Sciences 277:191–198.

Mast, T. G., J. H. Brann, and D. A. Fadool. 2010. The TRPC2 channel forms protein-protein interactions with Homer and RTP in the rat vomeronasal organ. BMC Neuroscience 11:61.

McGhee, K. E., and J. Travis. 2010. Repeatable behavioural type and stable dominance rank in the bluefin killifish. Animal Behaviour 79:497–507.

McGinnis, K. M. 2010. RNAi for functional genomics in plants. Briefings in Functional Genomics 9:111–117.

Miller, T. E., E. S. Gornish, and H. L. Buckley. 2010. Climate and coastal dune vegetation: disturbance, recovery, and succession. Plant Ecology 206:97–104.

Moeller, J. F., and M. Meredith. 2010. Differential co-localization with choline acetyltransferase in nervus terminalis suggests functional differences for GnRH isoforms in bonnethead sharks (Sphyrna tiburo). Brain Research 1366:44–53.

Murphy, S. P., C. R. Simmons, and H. W. Bass. 2010. Structure and expression of the maize (Zea mays L.) SUN-domain protein gene family: evidence for the existence of two divergent class of SUN proteins in plants. MBC Plant Biology 10:269.

Nierenberg, N., W. R. Tschinkel, and V. J. Tschinkel. 2010. An independent thinker, willing to say what he thought. Nature 466:435–435.

Nierenberg, N., W. R. Tschinkel, and V. J. Tschinkel. 2010. Early climate change consensus at the National Academy: the origins and making of Changing Climate. Historical Studies in the Natural Sciences 40:318–349.

Oberbeck, D. L., S. McCormack, and T. A. Houpt. 2010. Intra-amygdalar okadaic acid enhances conditioned taste aversion learning and CREB phosphorylation in rats. Brain Research 1348:84–94.

Pelabon, C., T. F. Hansen, A. J. R. Carter, and D. Houle. 2010. Evolution of variation and variability under fluctuating, stabilizing, and disruptive selection. Evolution 64:1912–1925.

Perkins, B. D., and J. M. Fadool. 2010. Photoreceptor structure and development: analyses using GFP transgenes. Methods in Cell Biology 100:205–218.

Pfaller, J. B., N. D. Herrera, P. M. Gignac, and G. M. Erickson. 2010. Ontogenetic scaling of cranial morphology and bite-force generation in the loggerhead musk turtle. Journal of Zoology 280:280–289.

Pombo, A., and D. M. Gilbert. 2010. Nucleus and gene expression: the structure and function conundrum. Current Opinion in Cell Biology 22:269–270.

Pope, B. D., I. Hiratani, and D. M. Gilbert. 2010. Domain-wide regulation of DNA replication timing during mammalian development. Chromosome Research 18:127–136.

Reuter, K. E., and D. R. Levitan. 2010. Influenceof sperm and phytoplankton on spawning in the echinoid Lytechinus variegatus. Biol. Bull. 219:198–206.

Robotham, J. M., L.-X. Xia, L. N. Willison, S. S. Teuber, S. K. Sathe, and K. H. Roux. 2010. Characterization of a cashew allergen, 11s globulin (Ana o 2), conformational epitope. Molecular Immunology 47:1830–1838.

Ryba, T., I. Hiratani, J.-J. Lu, M. Itoh, M. Kulik, J-.F. Zhang, T. C. Schulz, A. J. Robins, S. Dalton, and D. M. Gilbert. 2010. Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types. Genome Research 20:761–770.

Schelb, M., C. Vannahme, A. Welle, S. Lenhert, B. Ross, and T. Mappes. 2010. Fluorescence excitation on monolithically integrated all-polymer chips. Journal of Biomedical Optics 15:041517.

Seal, J. N., and W. R. Tschinkel. 2010. Distribution of the fungus-gardening ant (Trachymyrmex septentrionalis) during and after a record drought. Insect Conservation and Diversity 3:134–142.

Sharma, G. M., C. Mundoma, M. Seavy, K. H. Roux, and S. K. Sathe. 2010. Purification and biochemical characterization of Brazil nut (Bertholletia excelsa L.) seed storage proteins. Journal of Agricultural and Food Chemistry 58:5714–5723.

Sharma, G. M., M.-N. Su, A. U. Joshi, K. H. Roux, and S. K. Sathe. 2010. Functional properties of select edible oilseed proteins. Journal of Agricultural and Food Chemistry 58:5457–5464.

Smith, P. L., J. C. Smith, and T. A. Houpt. 2010. Interactions of temperature and taste in conditioned aversions. Physiology & Behavior 99:324–333.

Song, L. K., M. Larion, J. Chamoun, M. Bonora, and P. G. Fajer. 2010. Distance and dynamics determination by W-band DEER and W-band ST-EPR. European Biophysics Journal with Biophysics Letters 39:711–719.

Stafford, S. G., D. M. Bartels, S. Begay-Campbell, J. L. Bubier, J. C. Crittenden, S. L. Cutter, J. R. Delaney, T. E. Jordan, A. C. Kay, G. D. Libecap, J. C. Moore, N. N. Rabalais, D. Rejeski, O. E. Sala, J. M. Shepherd, and J. Travis. 2010. Now is the time for action: transitions and tipping points in complex environmental systems. Environment 52:38–45.

Tamori, Y., C. U. Bialucha, A.-G. Tian, M. Kajita, Y.-C. Huang, M. Norman, N. Harrison, J. Poulton, K. Ivanovitch, L. Disch, T. Liu, W.-M. Deng, and Y. Fujita. 2010. Involvement of Lgl and Mahjong/VprBP in cell competition. PLoS Biology 8:e1000422.

Tang, H.-L. 2010. Cyclophilin inhibitors as a novel HCV therapy. Viruses-Basel 2:1621–1634.

Terhorst, C. P., T. E. Miller, and D. R. Levitan. 2010. Evolution of prey in ecological time reduces the effect size of predators in experimental microcosms. Ecology 91:629–636.

terHorst, C. P., T. E. Miller, and E. Powell. 2010. When can competition for resources lead to ecological equivalence? Evolutionary Ecology and Research 12:843–854.

Tiwari, R. S.), M. Venkatachalam, G. M. Sharma, M. Su, K. H. Roux, and S. K. Sathe. 2010. Effect of food matrix on amandin, almond (Prunus dulcis L.) major protein, immunorecognition and recovery. LWT—Food Science and Technology 43:675–683.

Tomaiuolo, M., and D. R. Levitan. 2010. Modeling how reproductive ecology can drive protein diversification and result in linkage disequilibrium between sperm and egg proteins. American Naturalist 176:14–25.

Tremblay, D. C., G. Alexander, Jr., S, Moseley, and B. P. Chadwick. 2010. Expression, tandem repeat copy number variation and stability of four macrosatellite arrays in the human genome. BMC Genomics 11:632.

Tschinkel, W. R. 2010. Methods for casting subterranean ant nests. Journal of Insect Science 10:88.

Underwood, N. 2010. Density dependence in insect performance within individual plants: induced resistance to Spodoptera exigua in tomato. Oikos 119:1993–1999.

van der Linde, K., D. Houle, G. S. Spicer, and S. J. Steppan. 2010. A supermatrix-based molecular phylogeny of the family Drosophilidae. Genetics Research 92:25–38.

Wu, S.-P., J. Liu, M. C. Reedy, R. T. Tregear, H. Winkler, C. Franzini-Armstrong, H. Sasaki, C. Lucaveche, Y. E. Goldman, M. K. Reedy, and K. A. Taylor. 2010. Electron tomography of cryofixed, isometrically contracting insect flight muscle reveals novel actin-myosin interactions. PLoS One 5:e12643.

Xia, L.-X., L. N. Willison, L. Porter, J. M. Robotham, S. S. Teuber, S. K. Sathe, and K. H. Roux. 2010. Mapping of a conformational epitope on the cashew allergen Ana o 2: a discontinuous large subunit epitope dependent upon homologous or heterologous small subunit association. Molecular Immunology 47:1808–1816.

Yang, F., J. M. Robotham, H. Grisé, H. S. Frausto, V. Madan, M. Zayas, R. Bartenschlager, M. Robinson, A. E. Greenstein, A. Nag, T. M. Logan, E. Bienkiewicz, and H.-L. Tang. 2010. A major determinant of cyclophilin dependence and cyclosporine susceptibility of hepatitis C virus identified by a genetic approach. PLoS Pathogens 6:e1001118.

Ye, F., G.-Q. Hu, D. Taylor, B. Ratnikov, A. A. Bobkov, M. A. McLean, S. G. Sligar, K. A. Taylor, and M. H. Ginsberg. 2010. Recreation of the terminal events in physiological integrin activation. Journal of Cell Biology 188:157–173.

Yu, J.-Z., Y.-G. Zheng, J.-X. Dong, S. Klusza, W.-M. Deng, and D.-J. Pan. 2010. Kibra functions as a tumor suppressor protein that regulates Hippo signaling in conjunction with Merlin and Expanded. Developmental Cell 18:288–299.Zhang, H.-M., S. M. McLoughlin, S. D. Frausto, H.-L. Tang, M. R. Emmett, and A. G. Marshall. 2010. Simultaneous reduction and digestion of proteins with disulfide bonds for hydrogen/deuterium exchange monitored by mass spectrometry. Analytical Chemistry 82:1450–1454.

Zhu, F. X., N. Sathish, and Y. Yuan. 2010. Antagonism of host antiviral responses by Kaposi's sarcoma-associated herpesvirus tegument protein ORF45. PLoS One 5:e10573.